Uses of Interface jebl.evolution.graphs.Graph (JEBL2 lib API)

Packages that use Graph
Package Description

jebl.evolution.graphs

jebl.evolution.trees

Uses of Graph in jebl.evolution.graphs

Methods in jebl.evolution.graphs with parameters of type Graph
Modifier and Type	Method	Description
`static int`	Graph.Utils.`getDegree(Graph graph, Node node)`
`boolean`	Utils.`isAcyclical(Graph graph)`
`boolean`	Utils.`isConnected(Graph graph)`
`boolean`	Utils.`isTree(Graph graph)`

Uses of Graph in jebl.evolution.trees

Subinterfaces of Graph in jebl.evolution.trees
Modifier and Type	Interface	Description
`interface`	`RootedTree`	A tree with a root (node with maximum height).
`interface`	`Tree`	A rooted or unrooted tree.

Classes in jebl.evolution.trees that implement Graph
Modifier and Type	Class	Description
`class`	`CompactRootedTree`	A memory efficient rooted tree.
`class`	`FilteredRootedTree`
`class`	`MutableRootedTree`	A simple rooted tree providing some ability to manipulate the tree.
`class`	`ReRootedTree`
`class`	`RootedFromUnrooted`	Root an unrooted tree.
`class`	`RootedSubtree`	A simple, immutable rooted tree implementation that is a subtree of an existing tree subtending a specified set of taxa..
`class`	`SimpleRootedTree`	A simple, and initially immutable rooted tree implementation.
`class`	`SimpleTree`	A basic implementation on an unrooted tree.
`class`	`SortedRootedTree`
`class`	`TransformedRootedTree`	This RootedTree class wraps another RootedTree and transforms the branch lengths and node heights using various functions.