Field Detail

• FIXED_HEADER_LENGTH

  public static final int FIXED_HEADER_LENGTH

  See Also:

  Constant Field Values

• MAGIC_OFFSET

  public static final int MAGIC_OFFSET

  See Also:

  Constant Field Values

• bytes

  public byte[] bytes

• bigEndian

  public boolean bigEndian

• sizeof_hdr

  public int sizeof_hdr

• dim_info

  public byte dim_info

• dim

  public short[] dim

• intent_p1

  public float intent_p1

• intent_p2

  public float intent_p2

• intent_p3

  public float intent_p3

• intent_code

  public short intent_code

• intent

  public com.pixelmed.convert.NIfTI1Header.Intent intent

• datatype_code

  public short datatype_code

• datatype

  public com.pixelmed.convert.NIfTI1Header.DataType datatype

• bitpix

  public short bitpix

• slice_start

  public short slice_start

• pixdim

  public float[] pixdim

• vox_offset

  public float vox_offset

• scl_slope

  public float scl_slope

• scl_inter

  public float scl_inter

• slice_end

  public short slice_end

• slice_code

  public byte slice_code

• slice_order

  public com.pixelmed.convert.NIfTI1Header.SliceOrder slice_order

• xyzt_units_code

  public byte xyzt_units_code

• xyzt_units_code_spatial

  public byte xyzt_units_code_spatial

• xyzt_units_spatial

  public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_spatial

• xyzt_units_code_temporal

  public byte xyzt_units_code_temporal

• xyzt_units_temporal

  public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_temporal

• cal_max

  public float cal_max

• cal_min

  public float cal_min

• slice_duration

  public float slice_duration

• toffset

  public float toffset

• description

  public byte[] description

• aux_file

  public byte[] aux_file

• qform_code

  public short qform_code

• qform

  public com.pixelmed.convert.NIfTI1Header.CoordinateTransform qform

• sform_code

  public short sform_code

• sform

  public com.pixelmed.convert.NIfTI1Header.CoordinateTransform sform

• quatern_b

  public float quatern_b

• quatern_c

  public float quatern_c

• quatern_d

  public float quatern_d

• qoffset_x

  public float qoffset_x

• qoffset_y

  public float qoffset_y

• qoffset_z

  public float qoffset_z

• srow_x

  public float[] srow_x

• srow_y

  public float[] srow_y

• srow_z

  public float[] srow_z

• intent_name

  public byte[] intent_name

• magic

  public byte[] magic

Constructor Detail

• NIfTI1Header

  public NIfTI1Header​(java.io.File inputFile)
               throws java.io.IOException,
                      NIfTI1Exception

  Throws:

  java.io.IOException

  NIfTI1Exception

Method Detail

• isNIfTI1SingleFileMagicNumber

  public static boolean isNIfTI1SingleFileMagicNumber​(byte[] bytes,
                                                      int offset)

• isNIfTI1DualFileMagicNumber

  public static boolean isNIfTI1DualFileMagicNumber​(byte[] bytes,
                                                    int offset)

• isNIfTI1SingleFileMagicNumber

  public boolean isNIfTI1SingleFileMagicNumber()

• isNIfTI1DualFileMagicNumber

  public boolean isNIfTI1DualFileMagicNumber()

• getImageDataFile

  public static java.io.File getImageDataFile​(java.io.File headerFile)

• main

  public static void main​(java.lang.String[] arg)

  Read a NIfTI-1 image input format files and dump header.

  Parameters:

  arg - the inputFile,