Package com.pixelmed.dicom

Class StructuredReport

  • All Implemented Interfaces:
    javax.swing.tree.TreeModel
    public class StructuredReport
extends java.lang.Object
implements javax.swing.tree.TreeModel

    The StructuredReport class implements a TreeModel to abstract the contents of a list of attributes representing a DICOM Structured Report as a tree in order to provide support for a StructuredReportBrowser.

    For details of some of the methods implemented here see javax.swing.tree.TreeModel.

    A main method is provided for testing that reads a DICOM file containing an SR and dumps its contents in a human-readable form to System.err.

    See Also:
    ContentItem, ContentItemFactory, StructuredReportBrowser

    • Constructor Detail

      • StructuredReport

        public StructuredReport​(AttributeList list)
                 throws DicomException

        Construct an internal tree representation of a structured report from a list of DICOM attributes.

        Parameters:
        list - the list of attributes in which the structured report is encoded
        Throws:
        DicomException

      • StructuredReport

        public StructuredReport​(ContentItem root)
                 throws DicomException

        Construct an internal tree representation of a structured report from an existing root content item.

        Parameters:
        root - the root content item
        Throws:
        DicomException

    • Method Detail

      • getChild

        public java.lang.Object getChild​(java.lang.Object node,
                                 int index)
        Specified by:
        getChild in interface javax.swing.tree.TreeModel
        Parameters:
        node -
        index -

      • getIndexOfChild

        public int getIndexOfChild​(java.lang.Object parent,
                           java.lang.Object child)
        Specified by:
        getIndexOfChild in interface javax.swing.tree.TreeModel
        Parameters:
        parent -
        child -

      • getRoot

        public java.lang.Object getRoot()
        Specified by:
        getRoot in interface javax.swing.tree.TreeModel

      • getChildCount

        public int getChildCount​(java.lang.Object parent)
        Specified by:
        getChildCount in interface javax.swing.tree.TreeModel
        Parameters:
        parent -

      • isLeaf

        public boolean isLeaf​(java.lang.Object node)
        Specified by:
        isLeaf in interface javax.swing.tree.TreeModel
        Parameters:
        node -

      • valueForPathChanged

        public void valueForPathChanged​(javax.swing.tree.TreePath path,
                                java.lang.Object newValue)
        Specified by:
        valueForPathChanged in interface javax.swing.tree.TreeModel
        Parameters:
        path -
        newValue -

      • addTreeModelListener

        public void addTreeModelListener​(javax.swing.event.TreeModelListener tml)
        Specified by:
        addTreeModelListener in interface javax.swing.tree.TreeModel
        Parameters:
        tml -

      • removeTreeModelListener

        public void removeTreeModelListener​(javax.swing.event.TreeModelListener tml)
        Specified by:
        removeTreeModelListener in interface javax.swing.tree.TreeModel
        Parameters:
        tml -

      • getAttributeList

        public AttributeList getAttributeList()

        Return the entire content tree of a structured report as an AttributeList.

        Has the side effect of creating (or replacing) the ContentSequence attributes of the AttributeList of each ContentItem to represent the tree structure.

        Returns:
        a AttributeList representing the content tree, or null if empty root.

      • walkTreeBuldingString

        public static java.lang.String walkTreeBuldingString​(ContentItem node,
                                                     java.lang.String location)

        Dump the tree starting at the specified node as a String.

        Parameters:
        node -
        location - the dotted numeric string describing the location of the starting node
        Returns:
        a multi-line String representing the tree fragment

      • toString

        public java.lang.String toString()

        Dump the entire tree as a String.

        Overrides:
        toString in class java.lang.Object
        Returns:
        a multi-line String representing the tree

      • findAllContainedSOPInstances

        public static java.util.Vector findAllContainedSOPInstances​(ContentItem root,
                                                            ContentItem item)

        Find all coordinate and image references within content items of the sub-tree rooted at the specified node (which may be the root).

        The annotation of the reference is derived from the value of the Concept Name of the parent (and its parent, if a NUM content item).

        Parameters:
        root - the root node, for dereferencing by-reference relationships
        item - the node to start searching from
        Returns:
        a Vector of SpatialCoordinateAndImageReference

      • main

        public static void main​(java.lang.String[] arg)

        Dump the SR encoded in the file name on the console.

        Parameters:
        arg -