AlignCommand (JEBL2 lib API)

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java.lang.Object
- jebl.evolution.align.AlignCommand

```
public class AlignCommand
extends java.lang.Object
```
A command line interface for the algorithms in jebl.evolution.align. Imports from FASTA files.

Version:

$Id: AlignCommand.java 185 2006-01-23 23:03:18Z rambaut $

Author:

Richard Moir

- Constructor Summary
  
  Constructors
  Constructor Description
  
  AlignCommand()
  
  AlignCommand(java.lang.String sq1File, java.lang.String sq2File)
- Method Summary
  
  All Methods Static Methods Concrete Methods
  Modifier and Type Method Description
  
  static void main(java.lang.String[] args)
  - Methods inherited from class java.lang.Object
    equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AlignCommand
```
public AlignCommand()
```

AlignCommand

public AlignCommand(java.lang.String sq1File,
                    java.lang.String sq2File)

Method Detail

main

public static void main(java.lang.String[] args)

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http://code.google.com/p/jebl2/