Hamming (JEBL2 lib API)

Skip navigation links

All Classes

SEARCH:

Summary:
Nested |
Field |
Constr |
Method

Detail:
Field |
Constr |
Method

java.lang.Object
- jebl.evolution.align.scores.Scores
- - jebl.evolution.align.scores.NucleotideScores
  - - jebl.evolution.align.scores.Hamming

All Implemented Interfaces:

ScoreMatrix
```
public class Hamming
extends NucleotideScores
```
Version:

$Id: Hamming.java 185 2006-01-23 23:03:18Z rambaut $

Author:

Andrew Rambaut

- Field Summary
  - Fields inherited from class jebl.evolution.align.scores.NucleotideScores
    CLUSTALW, IUB
  - Fields inherited from class jebl.evolution.align.scores.Scores
    score
- Constructor Summary
  
  Constructors
  Constructor Description
  
  Hamming()
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  java.lang.String toString()
  - Methods inherited from class jebl.evolution.align.scores.NucleotideScores
    getAlphabet, getName
  - Methods inherited from class java.lang.Object
    equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
  - Methods inherited from class jebl.evolution.align.scores.Scores
    duplicate, forMatrix, getMatrixString, getScore, includeAdditionalCharacters, includeGaps

- Constructor Detail
  - Hamming
```
public Hamming()
```
- Method Detail
  - toString
```
public java.lang.String toString()
```
    Overrides:
    
    toString in class NucleotideScores

Skip navigation links

All Classes

Summary:
Nested |
Field |
Constr |
Method

Detail:
Field |
Constr |
Method

http://code.google.com/p/jebl2/